| Player | League Goals | Cup Goals | TOTAL | Strike Rate | Last Scored |
|---|---|---|---|---|---|
| Robert Duncanson | 16 | 3 | 19 | 0.63 | 18/03/2017 |
| Dennis Wyness | 7 | 1 | 8 | 0.22 | 10/12/2016 |
| Jordan Morrice | 5 | 0 | 5 | 0.21 | 10/12/2016 |
| Ross Still | 5 | 0 | 5 | 0.21 | 25/03/2017 |
| Gary McGowan | 3 | 1 | 4 | 0.36 | 04/03/2017 |
| Elliot Duff | 3 | 0 | 3 | 0.13 | 07/01/2017 |
| Glenn Murison | 3 | 0 | 3 | 0.08 | 01/04/2017 |
| Michael Clark | 1 | 1 | 2 | 0.10 | 07/01/2017 |
| Sean Webb | 2 | 0 | 2 | 0.07 | 04/03/2017 |
| Alexander Thoirs | 2 | 0 | 2 | 0.11 | 07/01/2017 |
| Neale Allan | 1 | 0 | 1 | 0.08 | 01/10/2016 |
| Joe Burr | 1 | 0 | 1 | 0.08 | 01/10/2016 |
| Matthew McDonald | 1 | 0 | 1 | 0.14 | 03/09/2016 |
| Calvin Roddie | 1 | 0 | 1 | 0.07 | 11/03/2017 |
| Lewis Ingram | 1 | 0 | 1 | 0.04 | 10/09/2016 |
| Neil McVittie | 0 | 1 | 1 | 0.14 | 11/02/2017 |
| Stuart Hodge | 1 | 0 | 1 | 0.06 | 12/11/2016 |
| Paul Napier | 0 | 1 | 1 | 0.04 | 26/10/2016 |
